In the daylight of biotechnology:Rcpp and R applications

Scientific tutorials and data application

Wednesday, February 24, 2016

Seqan an Rcpp

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https://uclrdata.wordpress.com/2013/04/05/unix-sequencing-tools-vs-bioconductor/

Seqan and rcpp

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https://uclrdata.wordpress.com/2013/05/01/rcpp-rcpparmadillo-seqan-sequence-analysis-part-3/
Tuesday, February 16, 2016

Rcpp: the Shell sort code with gaps function exemples

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shellsoert.htm /* * The method starts by sorting pairs of elements far apart from each other, then progressively reducing the...
Monday, February 15, 2016

Rcpp: reading file functions codes

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read.file.htm /* All these function are useful in Reading file.read_file_delime function read the file from start to end....

Merge sort: Rcpp integration code

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mergesort.htm /*sorting function using the merge sort algorithm */ #include <Rcpp.h> using namespace Rcpp; void i...

The first code:Rcpp

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sourceCpp  is the important function in Rcpp. The Rcpp code is written into file with'.cpp' extension. The cppFunction can be use...

Rcpp:the first step

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Rcpp uses the C++ compiler to produce a sharing library connectable with R environment. The fist step is to install  the Rtools program pr...
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